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» Shape based indexing for faster search of RNA family databas...
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BMCBI
2008
123views more  BMCBI 2008»
13 years 4 months ago
Shape based indexing for faster search of RNA family databases
Background: Most non-coding RNA families exert their function by means of a conserved, common secondary structure. The Rfam data base contains more than five hundred structurally ...
Stefan Janssen, Jens Reeder, Robert Giegerich
ISMB
2004
13 years 6 months ago
Exploiting conserved structure for faster annotation of non-coding RNAs without loss of accuracy
Motivation: Non-coding RNAs (ncRNAs)--functional RNA molecules not coding for proteins--are grouped into hundreds of families of homologs. To find new members of an ncRNA gene fam...
Zasha Weinberg, Walter L. Ruzzo
BMCBI
2011
12 years 8 months ago
Structator: fast index-based search for RNA sequence-structure patterns
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebas...
ICDAR
2007
IEEE
13 years 11 months ago
Curvelets Based Queries for CBIR Application in Handwriting Collections
This paper presents a new use of the Curvelet transform as a multiscale method for indexing linear singularities and curved handwritten shapes in documents images. As it belongs t...
Guillaume Joutel, Véronique Eglin, St&eacut...
ISBI
2004
IEEE
14 years 5 months ago
Search Space Partitioning Using Convex Hull and Concavity Features for Fast Medical Image Retrieval
A new approach is presented for partitioning an image database by classifying and indexing the convex hull shapes and the number of region concavities. The result is a significant...
Phillip Mlsna, Nikolay Sirakov