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» Sorting Genomes with Centromeres by Translocations
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BIOINFORMATICS
2005
68views more  BIOINFORMATICS 2005»
13 years 4 months ago
Efficient sorting of genomic permutations by translocation, inversion and block interchange
Sophia Yancopoulos, Oliver Attie, Richard Friedber...
RECOMB
2009
Springer
13 years 11 months ago
Counting All DCJ Sorting Scenarios
In genome rearrangements, the double cut and join (DCJ) operation, introduced by Yancopoulos et al., allows to represent most rearrangement events that could happen in multichromos...
Marília D. V. Braga, Jens Stoye
RECOMB
2010
Springer
13 years 3 months ago
The Problem of Chromosome Reincorporation in DCJ Sorting and Halving
We study two problems in the double cut and join (DCJ) model: sorting – transforming one multilinear genome into another and halving – transforming a duplicated genome into a p...
Jakub Kovác, Marília D. V. Braga, Je...
BMCBI
2007
132views more  BMCBI 2007»
13 years 5 months ago
Dependence of paracentric inversion rate on tract length
Background: We develop a Bayesian method based on MCMC for estimating the relative rates of pericentric and paracentric inversions from marker data from two species. The method al...
Thomas L. York, Richard Durrett, Rasmus Nielsen