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» Stability Analysis of Genetic Regulatory Network with Additi...
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BMCBI
2007
130views more  BMCBI 2007»
13 years 5 months ago
A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression da
Background: Proteins are the primary regulatory agents of transcription even though mRNA expression data alone, from systems like DNA microarrays, are widely used. In addition, th...
Reuben Thomas, Carlos J. Paredes, Sanjay Mehrotra,...
BIOCOMP
2010
13 years 3 months ago
Robust Stability Analysis and Design Under Consideration of Multiple Feedback Loops in the Tryptophan Regulatory Network of E. c
The tryptophan operon of E. coli represents an important regulatory unit consisting of multiple feedback loops. The role of these loops is crucial to understand the dynamics of tr...
Anke Meyer-Bäse, Fabian J. Theis
BMCBI
2010
100views more  BMCBI 2010»
13 years 5 months ago
Trimming of mammalian transcriptional networks using network component analysis
Background: Network Component Analysis (NCA) has been used to deduce the activities of transcription factors (TFs) from gene expression data and the TF-gene binding relationship. ...
Linh M. Tran, Daniel R. Hyduke, James C. Liao
BMCBI
2010
130views more  BMCBI 2010»
13 years 5 months ago
A statistical approach to finding overlooked genetic associations
Background: Complexity and noise in expression quantitative trait loci (eQTL) studies make it difficult to distinguish potential regulatory relationships among the many interactio...
Andrew K. Rider, Geoffrey Siwo, Nitesh V. Chawla, ...
INFOCOM
2003
IEEE
13 years 10 months ago
Stability and Convergence of TCP-like Congestion Controllers in a Many-Flows Regime
— With the rapid growth of Internet, parameter design and analysis for large-scale networks has become a topic of active interest. Since simulation of such large scale systems is...
Supratim Deb, Sanjay Shakkottai, R. Srikant