64 search results - page 1 / 13 » State of the art: refinement of multiple sequence alignments |
BMCBI
2010
13 years 4 months ago
2010
Correction to Chakrabarti S, Lanczycki CJ, Panchenko AR, Przytycka TM, Thiessen PA and Bryant SH: State of the art: refinement of multiple sequence alignments. BMC Bioinformatics ...
CSB
2005
IEEE
13 years 10 months ago
2005
IEEE
We present TreeRefiner, a tool for refining multiple alignments of biological sequences. Given a multiple alignment, a phylogenetic tree, and scoring parameters as input, TreeRefi...
BMCBI
2005
13 years 4 months ago
2005
Background: Genomic sequence data cannot be fully appreciated in isolation. Comparative genomics
ACL
2010
13 years 2 months ago
2010
Letter-phoneme alignment is usually generated by a straightforward application of the EM algorithm. We explore several alternative alignment methods that employ phonetics, integer...
GECCO
2003
Springer
13 years 10 months ago
2003
Springer
This article presents a model for DNA sequence alignment. In our model, a finite state automaton writes two-dimensional maps of nucleotide sequences. An evolutionary method for se...