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» Statistical tests to compare motif count exceptionalities
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BMCBI
2005
121views more  BMCBI 2005»
13 years 4 months ago
Automated methods of predicting the function of biological sequences using GO and BLAST
Background: With the exponential increase in genomic sequence data there is a need to develop automated approaches to deducing the biological functions of novel sequences with hig...
Craig E. Jones, Ute Baumann, Alfred L. Brown
BIOINFORMATICS
2011
12 years 11 months ago
All-atom knowledge-based potential for RNA structure prediction and assessment
Motivation: Over the recent years, the vision that RNA simply serves as information transfer molecule has dramatically changed. The study of the sequence/structure/function relati...
Emidio Capriotti, Tomás Norambuena, Marc A....
PROMISE
2010
12 years 11 months ago
Case-based reasoning vs parametric models for software quality optimization
Background: There are many data mining methods but few comparisons between them. For example, there are at least two ways to build quality optimizers, programs that find project o...
Adam Brady, Tim Menzies
BMCBI
2010
81views more  BMCBI 2010»
13 years 4 months ago
Empirical Bayes Analysis of Sequencing-based Transcriptional Profiling without Replicates
Background: Recent technological advancements have made high throughput sequencing an increasingly popular approach for transcriptome analysis. Advantages of sequencing-based tran...
Zhijin Wu, Bethany D. Jenkins, Tatiana A. Rynearso...
PROMISE
2010
12 years 11 months ago
Better, faster, and cheaper: what is better software?
Background: Defects are related to failures and they do not have much power for indicating a higher quality or a better system above the baseline that the end-users expect. Nevert...
Burak Turhan, Çetin Meriçli, Tekin M...