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» Statistics of large scale sequence searching
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GCB
1997
Springer
77views Biometrics» more  GCB 1997»
13 years 9 months ago
Statistics of large scale sequence searching
Motivation: Database search programs such as FASTA, BLAST or a rigorous Smith–Waterman algorithm produce lists of database entries, which are assumed to be related to the query....
Rainer Spang, Martin Vingron
ICPPW
2009
IEEE
13 years 3 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
AAAI
2008
13 years 7 months ago
Structure Learning on Large Scale Common Sense Statistical Models of Human State
Research has shown promise in the design of large scale common sense probabilistic models to infer human state from environmental sensor data. These models have made use of mined ...
William Pentney, Matthai Philipose, Jeff A. Bilmes
WEBI
2005
Springer
13 years 11 months ago
Multi-Faceted Information Retrieval System for Large Scale Email Archives
We profile a system for search and analysis of largescale email archives. The system builds around four facets: Content-based search engine, statistical topic model, automaticall...
Jukka Perkiö, Ville H. Tuulos, Wray L. Buntin...
ALMOB
2007
151views more  ALMOB 2007»
13 years 5 months ago
Local sequence alignments statistics: deviations from Gumbel statistics in the rare-event tail
Background: The optimal score for ungapped local alignments of infinitely long random sequences is known to follow a Gumbel extreme value distribution. Less is known about the imp...
Stefan Wolfsheimer, Bernd Burghardt, Alexander K. ...