Sciweavers

41 search results - page 1 / 9
» Stochastic Simulation Algorithms for Chemical Reactions
Sort
View
BIOCOMP
2008
13 years 6 months ago
Stochastic Simulation Algorithms for Chemical Reactions
Tae-Hyuk Ahn, Yang Cao, Layne T. Watson
ICCMS
2009
118views more  ICCMS 2009»
13 years 2 months ago
Optimized Parallel Implementation of Gillespie's First Reaction Method on Graphics Processing Units
The simulation of chemical reacting systems is one of the most challenging topics in Systems Biology, due to their complexity and inherent randomness. The Gillespie's Stochas...
Cristian Dittamo, Davide Cangelosi
CORR
2010
Springer
174views Education» more  CORR 2010»
13 years 4 months ago
Hybrid Numerical Solution of the Chemical Master Equation
We present a numerical approximation technique for the analysis of continuous-time Markov chains that describe networks of biochemical reactions and play an important role in the ...
Thomas A. Henzinger, Maria Mateescu, Linar Mikeev,...
CORR
2008
Springer
117views Education» more  CORR 2008»
13 years 4 months ago
Robust Stochastic Chemical Reaction Networks and Bounded Tau-Leaping
The behavior of some stochastic chemical reaction networks is largely unaffected by slight inaccuracies in reaction rates. We formalize the robustness of state probabilities to re...
David Soloveichik
BIBE
2005
IEEE
116views Bioinformatics» more  BIBE 2005»
13 years 10 months ago
Stochastic Model of Protease-Ligand Reactions
Prediction of protein tertiary structure based on amino acid sequence is one of the most challenging open questions in computational molecular biology. The two most common experim...
Paul E. Anderson, Douglas W. Raiford, Deacon J. Sw...