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PACT
2007
Springer
13 years 11 months ago
A Stochastic Semantics for BioAmbients
We consider BioAmbients, a calculus for specifying biological entities and for simulating and analysing their behaviour. We extend BioAmbients to take quantitative information into...
Linda Brodo, Pierpaolo Degano, Corrado Priami
CDC
2010
IEEE
141views Control Systems» more  CDC 2010»
12 years 12 months ago
Hybrid moment computation algorithm for biochemical reaction networks
Moment computation is essential to the analysis of stochastic kinetic models of biochemical reaction networks. It is often the case that the moment evolution, usually the first and...
Yun-Bo Zhao, Jongrae Kim, João Pedro Hespan...
CORR
2010
Springer
135views Education» more  CORR 2010»
13 years 1 months ago
SABRE: A Tool for Stochastic Analysis of Biochemical Reaction Networks
The importance of stochasticity within biological systems has been shown repeatedly during the last years and has raised the need for efficient stochastic tools. We present SABRE, ...
Frédéric Didier, Thomas A. Henzinger...
SAGA
2009
Springer
13 years 11 months ago
Scenario Reduction Techniques in Stochastic Programming
Stochastic programming problems appear as mathematical models for optimization problems under stochastic uncertainty. Most computational approaches for solving such models are base...
Werner Römisch
ISMVL
2007
IEEE
112views Hardware» more  ISMVL 2007»
13 years 11 months ago
Survey of Stochastic Computation on Factor Graphs
Stochastic computation is a new alternative approach for iterative computation on factor graphs. In this approach, the information is represented by the statistics of the bit stre...
Saeed Sharifi Tehrani, Shie Mannor, Warren J. Gros...