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» Stochastic multiscale approaches to consensus problems
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BMCBI
2004
133views more  BMCBI 2004»
13 years 5 months ago
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction
Background: RNA secondary structure prediction methods based on probabilistic modeling can be developed using stochastic context-free grammars (SCFGs). Such methods can readily co...
Robin D. Dowell, Sean R. Eddy
MMAS
2011
Springer
13 years 13 days ago
Scalable Bayesian Reduced-Order Models for Simulating High-Dimensional Multiscale Dynamical Systems
While existing mathematical descriptions can accurately account for phenomena at microscopic scales (e.g. molecular dynamics), these are often high-dimensional, stochastic and thei...
Phaedon-Stelios Koutsourelakis, Elias Bilionis
CDC
2010
IEEE
139views Control Systems» more  CDC 2010»
13 years 14 days ago
Communication, convergence, and stochastic stability in self-assembly
Existing work on programmable self assembly has focused on deterministic performance guarantees--stability of desirable states. In particular, for any acyclic target graph a binary...
Michael J. Fox, Jeff S. Shamma
TCBB
2011
13 years 12 days ago
Semantics and Ambiguity of Stochastic RNA Family Models
Stochastic models such as hidden Markov models or stochastic context free grammars can fail to return the correct, maximum likelihood solution in the case of semantic ambiguity. T...
Robert Giegerich, Christian Höner zu Siederdi...
CORR
2008
Springer
179views Education» more  CORR 2008»
13 years 5 months ago
Distributed Parameter Estimation in Sensor Networks: Nonlinear Observation Models and Imperfect Communication
The paper studies the problem of distributed static parameter (vector) estimation in sensor networks with nonlinear observation models and imperfect inter-sensor communication. We...
Soummya Kar, José M. F. Moura, Kavita Raman...