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BIRD
2008
Springer
13 years 7 months ago
Efficient Seeding Techniques for Protein Similarity Search
Abstract. We apply the concept of subset seeds proposed in [1] to similarity search in protein sequences. The main question studied is the design of efficient seed alphabets to con...
Mikhail A. Roytberg, Anna Gambin, Laurent No&eacut...
LATIN
1992
Springer
13 years 9 months ago
On Reversible Automata
A reversible automaton is a finite (possibly incomplete) automaton in which each letter induces a partial one-to-one map from the set of states into itself. We give four non-trivi...
Jean-Eric Pin
IWOCA
2010
Springer
219views Algorithms» more  IWOCA 2010»
13 years 3 days ago
Efficient Chaining of Seeds in Ordered Trees
We consider here the problem of chaining seeds in ordered trees. Seeds are mappings between two trees Q and T and a chain is a subset of non overlapping seeds that is consistent wi...
Julien Allali, Cedric Chauve, Pascal Ferraro, Anne...
EDBT
2008
ACM
159views Database» more  EDBT 2008»
14 years 5 months ago
Automaton in or out: run-time plan optimization for XML stream processing
Many systems such as Tukwila and YFilter combine automaton and algebra techniques to process queries over tokenized XML streams. Typically in this architecture, an automaton is fi...
Hong Su, Elke A. Rundensteiner, Murali Mani
ICPR
2004
IEEE
14 years 6 months ago
Feature Subset Selection using ICA for Classifying Emphysema in HRCT Images
Feature subset selection, applied as a pre-processing step to machine learning, is valuable in dimensionality reduction, eliminating irrelevant data and improving classifier perfo...
Mithun Nagendra Prasad, Arcot Sowmya, Inge Koch