7 search results - page 1 / 2 » Suffix Tree Characterization of Maximal Motifs in Biological... |
BIRD
2008
Springer
13 years 6 months ago
2008
Springer
Finding motifs in biological sequences is one of the most intriguing problems for string algorithms designers due to, on the one hand, the numerous applications of this problem in...
BMCBI
2007
13 years 5 months ago
2007
Background: False occurrences of functional motifs in protein sequences can be considered as random events due solely to the sequence composition of a proteome. Here we use a nume...
CSR
2006
Springer
13 years 8 months ago
2006
Springer
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
BMCBI
2010
13 years 5 months ago
2010
Background: While multiple alignment is the first step of usual classification schemes for biological sequences, alignment-free methods are being increasingly used as alternatives...
ICDE
2010
IEEE
13 years 9 months ago
2010
IEEE
Existing sequence mining algorithms mostly focus on mining for subsequences. However, a large class of applications, such as biological DNA and protein motif mining, require effici...