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» Survey of Biological High Performance Computing: Algorithms,...
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PSB
2001
13 years 7 months ago
A Multithreaded Parallel Implementation of a Dynamic Programming Algorithm for Sequence Comparison
This paper discusses the issues involved in implementing a dynamic programming algorithm for biological sequence comparison on a generalpurpose parallel computing platform based o...
W. S. Martins, Juan del Cuvillo, F. J. Useche, Kev...
FPGA
2004
ACM
174views FPGA» more  FPGA 2004»
13 years 11 months ago
A compiled accelerator for biological cell signaling simulations
The simulation of large systems of biochemical reactions is a key part of research into molecular signaling and information processing in biological cells. However, it can be impr...
John F. Keane, Christopher Bradley, Carl Ebeling
CLEIEJ
2002
113views more  CLEIEJ 2002»
13 years 5 months ago
The MT Stack: Paging Algorithm and Performance in a Distributed Virtual Memory System
Advances in parallel computation are of central importance to Artificial Intelligence due to the significant amount of time and space their programs require. Functional languages ...
Marco T. Morazán, Douglas R. Troeger, Myles...
ESCIENCE
2007
IEEE
14 years 3 days ago
Binary Data Transfer Performance over High-Latency Networks Using Web Service Attachments
One of the objectives of e-Research is to help scientists to accomplish their research, including scientific experiments, more effectively and efficiently. Web services provide ...
Donglai Zhang, Paul D. Coddington, Andrew L. Wende...
CHES
2008
Springer
134views Cryptology» more  CHES 2008»
13 years 7 months ago
Ultra High Performance ECC over NIST Primes on Commercial FPGAs
Elliptic Curve Cryptosystems (ECC) have gained increasing acceptance in practice due to their significantly smaller bit size of the operands compared to other public-key cryptosyst...
Tim Güneysu, Christof Paar