Background: The analysis of biochemical networks using a logical (Boolean) description is an important approach in Systems Biology. Recently, new methods have been proposed to ana...
Julio Saez-Rodriguez, Sebastian Mirschel, Rebecca ...
In this paper, we consider quantitative temporal or spatial constraint networks whose constraints evolve over time in an ultimately periodic fashion. These constraint networks are...
Integrated modeling of temporal and logical constraints is important for solving real-life planning and scheduling problems. Logical constrains extend the temporal formalism by rea...
Background: Genetic regulatory networks (GRN) can be described by differential equations with SUM logic which has been found in many natural systems. Identification of the network...
Networks are becoming a unifying framework for modeling complex systems and network inference problems are frequently encountered in many fields. Here, I develop and apply a gener...