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» The EcoCyc and MetaCyc databases
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NAR
2006
66views more  NAR 2006»
13 years 4 months ago
MetaCyc: a multiorganism database of metabolic pathways and enzymes
Ron Caspi, Hartmut Foerster, Carol A. Fulcher, Reb...
NAR
2002
84views more  NAR 2002»
13 years 4 months ago
The MetaCyc Database
Peter D. Karp, Monica Riley, Suzanne M. Paley, Ali...
ISMB
1998
13 years 6 months ago
BioSim: A New Qualitative Simulation Environment for Molecular Biology
Traditionally, biochemical systems are modelled usingkinetics anddifferential equationsin a quantitative simulator. However,for manybiological processes detailed quantitative info...
Karsten R. Heidtke, Steffen Schulze-Kremer
ISMB
1993
13 years 6 months ago
Representations of Metabolic Knowledge
Construction of electronic repositories of metabolic information is an increasingly active area of research. Encoding detailed knowledge of a complex biological domain requires ï¬...
Peter D. Karp, Monica Riley
BMCBI
2011
12 years 8 months ago
Reconstructing genome-wide regulatory network of E. coli using transcriptome data and predicted transcription factor activities
Background: Gene regulatory networks play essential roles in living organisms to control growth, keep internal metabolism running and respond to external environmental changes. Un...
Yao Fu, Laura R. Jarboe, Julie A. Dickerson