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» The Factor Graph Network Model for Biological Systems
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CMSB
2009
Springer
14 years 9 days ago
Modelling Biological Clocks with Bio-PEPA: Stochasticity and Robustness for the Neurospora crassa Circadian Network
Circadian clocks are biochemical networks, present in nearly all living organisms, whose function is to regulate the expression of specific mRNAs and proteins to synchronise rhyth...
Ozgur E. Akman, Federica Ciocchetta, Andrea Degasp...
ECCB
2005
IEEE
13 years 11 months ago
A query language for biological networks
Many areas of modern biology are concerned with the management, storage, visualization, comparison, and analysis of networks. For instance, networks are used to model signal trans...
Ulf Leser
BMCBI
2010
147views more  BMCBI 2010»
13 years 5 months ago
Learning biological network using mutual information and conditional independence
Background: Biological networks offer us a new way to investigate the interactions among different components and address the biological system as a whole. In this paper, a revers...
Dong-Chul Kim, Xiaoyu Wang, Chin-Rang Yang, Jean G...
SDM
2010
SIAM
217views Data Mining» more  SDM 2010»
13 years 4 months ago
Collaborative Filtering: Weighted Nonnegative Matrix Factorization Incorporating User and Item Graphs
Collaborative filtering is an important topic in data mining and has been widely used in recommendation system. In this paper, we proposed a unified model for collaborative fil...
Quanquan Gu, Jie Zhou, Chris H. Q. Ding