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» The UCSC Genome Browser database: update 2011
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BMCBI
2006
135views more  BMCBI 2006»
13 years 5 months ago
iHAP - integrated haplotype analysis pipeline for characterizing the haplotype structure of genes
Background: The advent of genotype data from large-scale efforts that catalog the genetic variants of different populations have given rise to new avenues for multifactorial disea...
Chun Meng Song, Boon Huat Yeo, Erwin Tantoso, Yuch...
BMCBI
2010
161views more  BMCBI 2010»
13 years 5 months ago
GATExplorer: Genomic and Transcriptomic Explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs
Background: Genome-wide expression studies have developed exponentially in recent years as a result of extensive use of microarray technology. However, expression signals are typi...
Alberto Risueño, Celia Fontanillo, Marcel E...
NAR
2011
194views Computer Vision» more  NAR 2011»
12 years 8 months ago
GreenPhylDB v2.0: comparative and functional genomics in plants
GreenPhylDB is a database designed for comparative and functional genomics based on complete genomes. Version 2 now contains sixteen full genomes of members of the plantae kingdom...
Mathieu Rouard, Valentin Guignon, Christelle Aluom...
NAR
2011
221views Computer Vision» more  NAR 2011»
12 years 8 months ago
AGRIS: the Arabidopsis Gene Regulatory Information Server, an update
The Arabidopsis Gene Regulatory Information Server (AGRIS; http://arabidopsis.med.ohio-state .edu/) provides a comprehensive resource for gene regulatory studies in the model plan...
Alper Yilmaz, Maria Katherine Mejia-Guerra, Kyle K...
BMCBI
2010
160views more  BMCBI 2010»
13 years 23 days ago
eHive: An Artificial Intelligence workflow system for genomic analysis
Background: The Ensembl project produces updates to its comparative genomics resources with each of its several releases per year. During each release cycle approximately two week...
Jessica Severin, Kathryn Beal, Albert J. Vilella, ...