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BMCBI
2010
139views more  BMCBI 2010»
13 years 6 months ago
PoGO: Prediction of Gene Ontology terms for fungal proteins
Background: Automated protein function prediction methods are the only practical approach for assigning functions to genes obtained from model organisms. Many of the previously re...
Jaehee Jung, Gangman Yi, Serenella A. Sukno, Micha...
BMCBI
2008
204views more  BMCBI 2008»
13 years 6 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...
NAR
2007
102views more  NAR 2007»
13 years 5 months ago
ProtSweep, 2Dsweep and DomainSweep: protein analysis suite at DKFZ
The wealth of transcript information that has been made publicly available in recent years has led to large pools of individual web sites offering access to bioinformatics softwar...
Coral del Val, Peter Ernst, Mechthild Falkenhahn, ...
BMCBI
2006
181views more  BMCBI 2006»
13 years 5 months ago
Array2BIO: from microarray expression data to functional annotation of co-regulated genes
Background: There are several isolated tools for partial analysis of microarray expression data. To provide an integrative, easy-to-use and automated toolkit for the analysis of A...
Gabriela G. Loots, Patrick S. G. Chain, Shalini Ma...
BMCBI
2010
139views more  BMCBI 2010»
13 years 6 months ago
TOPSAN: a collaborative annotation environment for structural genomics
Background: Many protein structures determined in high-throughput structural genomics centers, despite their significant novelty and importance, are available only as PDB depositi...
Dana Weekes, S. Sri Krishna, Constantina Bakolitsa...