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ALIFE
2004
13 years 5 months ago
Avida: A Software Platform for Research in Computational Evolutionary Biology
The Avida digital evolution platform is a software tool used to perform experimental evolution research with self-replicating computer programs ("digital organisms"). Av...
Charles Ofria, Claus O. Wilke
RECOMB
1998
Springer
13 years 9 months ago
Dynamic programming alignment accuracy
Ian Holmes, Richard Durbin
CLUSTER
2003
IEEE
13 years 10 months ago
Parallel Design Pattern for Computational Biology and Scientific Computing Applications
Dynamic programming is an important algorithm design technique in computational biology and scientific computing. Typical applications using this technique are very compute-intens...
Weiguo Liu, Bertil Schmidt
ISHPC
2000
Springer
13 years 8 months ago
Automatic Generation of OpenMP Directives and Its Application to Computational Fluid Dynamics Codes
The shared-memory programming model is a very effective way to achieve parallelism on shared memory parallel computers. As great progress was made in hardware and software technolo...
Haoqiang Jin, Michael A. Frumkin, Jerry C. Yan