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» The relative value of operon predictions
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BIB
2008
74views more  BIB 2008»
13 years 5 months ago
The relative value of operon predictions
For most organisms, computational operon predictions are the only source of genome-wide operon information. Operon prediction methods described in literature are based on (a combi...
Rutger W. W. Brouwer, Oscar P. Kuipers, Sacha A. F...
BMCBI
2006
102views more  BMCBI 2006»
13 years 5 months ago
MycoperonDB: a database of computationally identified operons and transcriptional units in Mycobacteria
Background: A key post genomics challenge is to identify how genes in an organism come together and perform physiological functions. An important first step in this direction is t...
Sarita Ranjan, Ranjit Kumar Gundu, Akash Ranjan
BMCBI
2004
91views more  BMCBI 2004»
13 years 5 months ago
SIGI: score-based identification of genomic islands
Background: Genomic islands can be observed in many microbial genomes. These stretches of DNA have a conspicuous composition with regard to sequence or encoded functions. Genomic ...
Rainer Merkl
CSB
2005
IEEE
118views Bioinformatics» more  CSB 2005»
13 years 11 months ago
Gene Teams with Relaxed Proximity Constraint
Functionally related genes co-evolve, probably due to the strong selection pressure in evolution. Thus we expect that they are present in multiple genomes. Physical proximity amon...
Sun Kim, Jeong-Hyeon Choi, Jiong Yang
TC
2002
13 years 4 months ago
On Augmenting Trace Cache for High-Bandwidth Value Prediction
Value prediction is a technique that breaks true data dependences by predicting the outcome of an instruction and speculatively executes its data-dependent instructions based on th...
Sang Jeong Lee, Pen-Chung Yew