11 search results - page 1 / 3 » Thermodynamics of RNA-RNA Binding |
GCB
2005
Springer
13 years 10 months ago
2005
Springer
We present an extension of the standard partition function approach to RNA secondary structures that computes the probabilities Pu[i, j] that a sequence interval [i, j] is unpaired...
BMCBI
2010
13 years 5 months ago
2010
Background: The binding of peptide fragments of extracellular peptides to class II MHC is a crucial event in the adaptive immune response. Each MHC allotype generally binds a dist...
BIRD
2008
Springer
2008
Springer
Translational Control by RNA-RNA Interaction: Improved Computation of RNA-RNA Binding Thermodynamics
13 years 6 months ago
The thermodynamics of RNA-RNA interaction consists of two components: the energy necessary to make a potential binding region accessible, i.e., unpaired, and the energy gained from...
BMCBI
2010
13 years 2 months ago
2010
Background: DNA instability profiles have been used recently for predicting the transcriptional start site and the location of core promoters, and to gain insight into promoter ac...
BMCBI
2010
13 years 5 months ago
2010
Background: While microarrays are the predominant method for gene expression profiling, probe signal variation is still an area of active research. Probe signal is sequence depend...