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» Tilings and model theory
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UPP
2004
Springer
13 years 10 months ago
Design, Simulation, and Experimental Demonstration of Self-assembled DNA Nanostructures and Motors
Self-assembly is the spontaneous self-ordering of substructures into superstructures driven by the selective affinity of the substructures. DNA provides a molecular scale material...
John H. Reif, Thomas H. LaBean, Sudheer Sahu, Hao ...
NC
2011
232views Neural Networks» more  NC 2011»
13 years 7 days ago
The effect of malformed tiles on tile assemblies within the kinetic tile assembly model
Many different constructions of proofreading tile sets have been proposed in the literature to reduce the effect of deviations from ideal behaviour of the dynamics of the molecular...
Ya Meng, Navin Kashyap
DNA
2009
Springer
194views Bioinformatics» more  DNA 2009»
13 years 9 months ago
A Domain-Specific Language for Programming in the Tile Assembly Model
We introduce a domain-specific language (DSL) for creating sets of tile types for simulations bstract Tile Assembly Model. The language defines objects known as tile templates, wh...
David Doty, Matthew J. Patitz
SAC
2009
ACM
14 years 2 days ago
Two lower bounds for self-assemblies at temperature 1
Abstract—Using the Tile Assembly Model proposed by Rothemund and Winfree, we give two lower bounds on the minimum number of tile types needed to uniquely assemble a shape at temp...
Ján Manuch, Ladislav Stacho, Christine Stol...
SODA
2004
ACM
160views Algorithms» more  SODA 2004»
13 years 6 months ago
Complexities for generalized models of self-assembly
In this paper, we extend Rothemund and Winfree's examination of the tile complexity of tile self-assembly [6]. They provided a lower bound of ( log N log log N ) on the tile ...
Gagan Aggarwal, Michael H. Goldwasser, Ming-Yang K...