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DAC
2003
ACM
14 years 6 months ago
Automated synthesis of efficient binary decoders for retargetable software toolkits
A binary decoder is a common component of software development tools such as instruction set simulators, disassemblers and debuggers. The efficiency of the decoder can have a sign...
Wei Qin, Sharad Malik
FCCM
2011
IEEE
311views VLSI» more  FCCM 2011»
12 years 9 months ago
String Matching in Hardware Using the FM-Index
—String matching is a ubiquitous problem that arises in a wide range of applications in computing, e.g., packet routing, intrusion detection, web querying, and genome analysis. D...
Edward Fernandez, Walid Najjar, Stefano Lonardi
BMCBI
2006
112views more  BMCBI 2006»
13 years 5 months ago
A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database
Background: We present here the PhIGs database, a phylogenomic resource for sequenced genomes. Although many methods exist for clustering gene families, very few attempt to create...
Paramvir S. Dehal, Jeffrey L. Boore
BMCBI
2004
101views more  BMCBI 2004»
13 years 5 months ago
A database for G proteins and their interaction with GPCRs
Background: G protein-coupled receptors (GPCRs) transduce signals from extracellular space into the cell, through their interaction with G proteins, which act as switches forming ...
Antigoni L. Elefsinioti, Pantelis G. Bagos, Ioanni...
WWW
2002
ACM
14 years 6 months ago
Accelerated focused crawling through online relevance feedback
The organization of HTML into a tag tree structure, which is rendered by browsers as roughly rectangular regions with embedded text and HREF links, greatly helps surfers locate an...
Soumen Chakrabarti, Kunal Punera, Mallela Subraman...