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» USPEX - Evolutionary crystal structure prediction
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BMCBI
2008
102views more  BMCBI 2008»
13 years 5 months ago
Combining sequence-based prediction methods and circular dichroism and infrared spectroscopic data to improve protein secondary
Background: A number of sequence-based methods exist for protein secondary structure prediction. Protein secondary structures can also be determined experimentally from circular d...
Jonathan G. Lees, Robert W. Janes
BIBE
2005
IEEE
116views Bioinformatics» more  BIBE 2005»
13 years 10 months ago
Stochastic Model of Protease-Ligand Reactions
Prediction of protein tertiary structure based on amino acid sequence is one of the most challenging open questions in computational molecular biology. The two most common experim...
Paul E. Anderson, Douglas W. Raiford, Deacon J. Sw...
BIOCOMP
2006
13 years 6 months ago
Structure Prediction of Potato Large Subunit ADP - Glucose Pyrophosphorylase
- ADP-glucose pyrophosphorylase, a key enzyme involved in the biosynthesis of starch in higher plants, is composed of pairs of large (LS) and small subunits (SS). Its catalytic act...
Aytug Tuncel, I. Halil Kavakli, Ozlem Keskin
BMCBI
2006
101views more  BMCBI 2006»
13 years 4 months ago
Predicting residue contacts using pragmatic correlated mutations method: reducing the false positives
Background: Predicting residues' contacts using primary amino acid sequence alone is an important task that can guide 3D structure modeling and can verify the quality of the ...
Petras J. Kundrotas, Emil Alexov
BMCBI
2007
96views more  BMCBI 2007»
13 years 4 months ago
Structure and function predictions of the Msa protein in Staphylococcus aureus
Background: Staphylococcus aureus is a human pathogen that causes a wide variety of lifethreatening infections using a large number of virulence factors. One of the major global r...
Vijayaraj Nagarajan, Mohamed O. Elasri