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CMSB
2010
Springer
12 years 12 months ago
Understanding signalling networks as collections of signal transduction pathways
Robin Donaldson, Carolyn L. Talcott, Merrill Knapp...
BMCBI
2007
166views more  BMCBI 2007»
13 years 5 months ago
PathFinder: mining signal transduction pathway segments from protein-protein interaction networks
Background: A Signal transduction pathway is the chain of processes by which a cell converts an extracellular signal into a response. In most unicellular organisms, the number of ...
Gürkan Bebek, Jiong Yang
BMCBI
2011
12 years 12 months ago
Context-dependent transcriptional regulations between signal transduction pathways
Background: Cells coordinate their metabolism, proliferation, and cellular communication according to environmental cues through signal transduction. Because signal transduction h...
Sohyun Hwang, Sangwoo Kim, Heesung Shin, Doheon Le...
RECOMB
2005
Springer
14 years 5 months ago
The Pathalyzer: A Tool for Analysis of Signal Transduction Pathways
Abstract. The Pathalyzer is a program for analyzing large-scale signal transduction networks. Reactions and their substrates and products are represented as transitions and places ...
David L. Dill, Merrill Knapp, Pamela Gage, Carolyn...
ACMSE
2005
ACM
13 years 10 months ago
Heuristics for dependency conjectures in proteomic signaling pathways
A key issue in the study of protein signaling networks is understanding the relationships among proteins in the network. Understanding these relationships in the context of a netw...
Edward E. Allen, Jacquelyn S. Fetrow, David J. Joh...