117 search results - page 1 / 24 » Using Hybrid Alignment for Iterative Sequence Database Searc... |
IPPS
2003
IEEE
13 years 10 months ago
2003
IEEE
Progressive sequence model refinement by means of iterative searches is an effective technique for high sensitivity database searches and is currently employed in popular tools s...
BIBE
2005
IEEE
13 years 10 months ago
2005
IEEE
PSI-BLAST remains one of the popular tools for searching remote homologs in sequence databases. We recently demonstrated that hybrid alignment can function as the alignment core f...
CP
2003
Springer
13 years 10 months ago
2003
Springer
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
GCB
2001
Springer
13 years 9 months ago
2001
Springer
DATESO
2007
13 years 6 months ago
2007
When searching databases of nucleotide or protein sequences, finding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...