78 search results - page 2 / 16 » Using PQ Trees for Comparative Genomics |
RECOMB
2004
Springer
14 years 5 months ago
2004
Springer
We have developed a multiple genome alignment algorithm by using a sequence clustering algorithm to combine local pairwise genome sequence matches produced by pairwise genome align...
JDA
2007
13 years 5 months ago
2007
In the median problem, we are given a distance or dissimilarity measure d, three genomes G1, G2, and G3, and we want to find a genome G (a median) such that the sum 3 i=1 d(G, Gi...
BMCBI
2010
13 years 7 days ago
2010
Background: The Ensembl project produces updates to its comparative genomics resources with each of its several releases per year. During each release cycle approximately two week...
BMCBI
2006
13 years 5 months ago
2006
Background: To infer the tree of life requires knowledge of the common characteristics of each species descended from a common ancestor as the measuring criteria and a method to c...
BMCBI
2010
13 years 5 months ago
2010
Background: The pan-genome of a bacterial species consists of a core and an accessory gene pool. The accessory genome is thought to be an important source of genetic variability i...