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» Variable Order Finite-Context Models in DNA Sequence Coding
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BMCBI
2011
13 years 6 days ago
PICS-Ord: Unlimited Coding of Ambiguous Regions by Pairwise Identity and Cost Scores Ordination
Background: We present a novel method to encode ambiguously aligned regions in fixed multiple sequence alignments by ‘Pairwise Identity and Cost Scores Ordination’ (PICS-Ord)....
Robert K. Luecking, Brendan P. Hodkinson, Alexandr...
BMCBI
2007
114views more  BMCBI 2007»
13 years 5 months ago
Gene models from ESTs (GeneModelEST): an application on the Solanum lycopersicum genome
Background: The structure annotation of a genome is based either on ab initio methodologies or on similaritiy searches versus molecules that have been already annotated. Ab initio...
Nunzio D'Agostino, Alessandra Traini, Luigi Frusci...
RECOMB
2002
Springer
14 years 5 months ago
Comparison of minisatellites
In the class of repeated sequences that occur in DNA, minisatellites have been found polymorphic and became useful tools in genetic mapping and forensic studies. They consist of a...
Eric Rivals, Sèverine Bérard
TRIER
2002
13 years 4 months ago
Precise Interprocedural Dependence Analysis of Parallel Programs
It is known that interprocedural detection of copy constants and elimination of faint code in parallel programs are undecidable problems, if base statements are assumed to execute...
Markus Müller-Olm