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BMCBI
2006
159views more  BMCBI 2006»
13 years 5 months ago
ProtRepeatsDB: a database of amino acid repeats in genomes
Background: Genome wide and cross species comparisons of amino acid repeats is an intriguing problem in biology mainly due to the highly polymorphic nature and diverse functions o...
Mridul K. Kalita, Gowthaman Ramasamy, Sekhar Durai...
ACID
2006
298views Algorithms» more  ACID 2006»
13 years 6 months ago
Congestion Games: Optimization in Competition
In a congestion game, several players simultaneously aim at allocating sets of resources, e.g., each player aims at allocating a shortest path between a source/destination pair in ...
Berthold Vöcking
ACID
2006
264views Algorithms» more  ACID 2006»
13 years 6 months ago
A Parameterized View on Matroid Optimization Problems
Matroid theory gives us powerful techniques for understanding combinatorial optimization problems and for designing polynomial-time algorithms. However, several natural matroid pr...
Dániel Marx
JCB
2006
185views more  JCB 2006»
13 years 5 months ago
Identification of Amino Acid Latent Periodicity within 94 Protein Families
Here, we have applied information decomposition, cyclic profile alignment, and noise decomposition techniques to search for latent repeats within protein families of various funct...
Vera P. Turutina, Andrew A. Laskin, Nikolay A. Kud...
BIOCOMP
2006
13 years 6 months ago
A New Algorithm to Predict the Active Sites Using Amino Acid Vectors and Biochemical features of Surface Patches
: It is a very active research field to predict protein functions and active sites by protein surface patches. It is especially challengeable to predict the active sites by structu...
Sunshin Kim, Chung Rhee, Jungdo Choi, Yong Je Chun...