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BIBE
2007
IEEE
214views Bioinformatics» more  BIBE 2007»
13 years 12 months ago
Histogram Transformation for Inter-Modality Image Registration
Abstract—This paper describes an efficient image transformation method based on histogram information and some prior knowledge of tissue expression in different modalities for r...
Joerg Meyer
BIBE
2007
IEEE
108views Bioinformatics» more  BIBE 2007»
13 years 12 months ago
Using Parsimony to Guide Maximum Likelihood Searches
—The performance of maximum likelihood searches can be boosted by using the most parsimonious tree as a starting point for the search. The time spent in performing the parsimony ...
Kenneth Sundberg, Timothy O'Connor, Hyrum Carroll,...
BIBE
2007
IEEE
113views Bioinformatics» more  BIBE 2007»
13 years 12 months ago
Quantitative and Probabilistic Modeling in Pathway Logic
—This paper presents a study of possible extensions of Pathway Logic to represent and reason about semiquantitative and probabilistic aspects of biological processes. The underly...
Alessandro Abate, Yu Bai, Nathalie Sznajder, Carol...
BIBE
2007
IEEE
150views Bioinformatics» more  BIBE 2007»
13 years 12 months ago
Differential Scoring for Systolic Sequence Alignment
Systolic implementations of dynamic programming solutions that utilize a similarity matrix can achieve appreciable performance with both course- and fine-grain parallelization. A ...
Antonio E. de la Serna
BIBE
2007
IEEE
126views Bioinformatics» more  BIBE 2007»
13 years 7 months ago
FPGA Acceleration of Phylogeny Reconstruction for Whole Genome Data
In this paper we describe our design and characterization of a co-processor architecture to accelerate median-based phylogenetic reconstruction for generearrangement data. Our curr...
Jason D. Bakos, Panormitis E. Elenis, Jijun Tang