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BIBE
2010
IEEE
148views Bioinformatics» more  BIBE 2010»
13 years 26 days ago
Prediction of Gene Ontology Annotations Based on Gene Functional Clustering
We propose an algorithm that predicts potentially missing Gene Ontology annotations, in order to speed up the time-consuming annotation curation process. The proposed method extend...
Marco Tagliasacchi, Roberto Sarati, Marco Masserol...
BIBE
2010
IEEE
137views Bioinformatics» more  BIBE 2010»
13 years 7 months ago
Comparison of Gene Prediction Programs for Metagenomic Data
This manuscript presents the most rigorous benchmarking of gene annotation algorithms for metagenomic datasets to date. We compare three different programs: GeneMark, MetaGeneAnnot...
Non Yok, Gail Rosen
BIBE
2010
IEEE
142views Bioinformatics» more  BIBE 2010»
13 years 26 days ago
Compressed q-Gram Indexing for Highly Repetitive Biological Sequences
The study of compressed storage schemes for highly repetitive sequence collections has been recently boosted by the availability of cheaper sequencing technologies and the flood of...
Francisco Claude, Antonio Fariña, Miguel A....
BIBE
2010
IEEE
146views Bioinformatics» more  BIBE 2010»
13 years 7 months ago
Methods for Designing Reliable Probe Arrays
Recent advances in biosensing technologies have led to applications of biosensor probe arrays for rapid identification of biological agents such as drugs, gene expressions, protein...
Michele Lombardi, Luca Benini, Abhishek Garg, Giov...
BIBE
2010
IEEE
135views Bioinformatics» more  BIBE 2010»
13 years 6 months ago
Finding Dynamic Modules of Biological Regulatory Networks
—Often groups of genes in regulatory networks, also called modules, work collaboratively on similar functions. Mathematically, the modules in a regulatory network has often been ...
Ferhat Ay, Thang N. Dinh, My T. Thai, Tamer Kahvec...