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CIBCB
2006
IEEE
13 years 11 months ago
Motif Evaluation by Leave-one-out Scoring
Abstract— We propose a new method for collecting information on regulatory elements found by any motif discovery program. We suggest that combining the results of n leave-oneout ...
Audrey Girouard, Noah W. Smith, Donna K. Slonim
CIBCB
2006
IEEE
13 years 11 months ago
A Model-Free Greedy Gene Selection for Microarray Sample Class Prediction
— Microarray data analysis is notoriously challenging as it involves a huge number of genes compared to only a limited number of samples. Gene selection, to detect the most signi...
Yi Shi, Zhipeng Cai, Lizhe Xu, Wei Ren, Randy Goeb...
CIBCB
2006
IEEE
13 years 11 months ago
E2D: A Novel Tool for Annotating Protein Domains in Expressed Sequence Tags
The vast number of expressed sequence tags (ESTs) in public databases provides an important resource for comparative and functional genomics. A variety of methods based on homology...
Guo-Hsing Lee, Nai-Yu Chuang, Wen-Dar Lin, Chung-D...
CIBCB
2006
IEEE
13 years 11 months ago
A Stochastic model to estimate the time taken for Protein-Ligand Docking
Abstract— Quantum mechanics and molecular dynamic simulation provide important insights into structural configurations and molecular interaction data today. To extend this atomi...
Preetam Ghosh, Samik Ghosh, Kalyan Basu, Sajal K. ...
CIBCB
2006
IEEE
13 years 11 months ago
A Novel Graphical Model Approach to Segmenting Cell Images
— Successful biological image analysis usually requires satisfactory segmentations to identify regions of interest as an intermediate step. Here we present a novel graphical mode...
Shann-Ching Chen, Ting Zhao, Geoffrey J. Gordon, R...