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BMCBI
2006
111views more  BMCBI 2006»
13 years 5 months ago
Tools for integrated sequence-structure analysis with UCSF Chimera
Background: Comparing related structures and viewing the structures in the context of sequence alignments are important tasks in protein structure-function research. While many pr...
Elaine C. Meng, Eric F. Pettersen, Gregory S. Couc...
HPCA
2006
IEEE
14 years 5 months ago
LogTM: log-based transactional memory
Transactional memory (TM) simplifies parallel programming by guaranteeing that transactions appear to execute atomically and in isolation. Implementing these properties includes p...
Kevin E. Moore, Jayaram Bobba, Michelle J. Moravan...
CODES
2006
IEEE
13 years 11 months ago
Generic netlist representation for system and PE level design exploration
Designer productivity and design predictability are vital factors for successful embedded system design. Shrinking time-to-market and increasing complexity of these systems requir...
Bita Gorjiara, Mehrdad Reshadi, Pramod Chandraiah,...
ICDCS
2006
IEEE
13 years 11 months ago
PRINS: Optimizing Performance of Reliable Internet Storages
Distributed storage systems employ replicas or erasure code to ensure high reliability and availability of data. Such replicas create great amount of network traffic that negative...
Qing Yang, Weijun Xiao, Jin Ren
ICPP
2006
IEEE
13 years 11 months ago
Scalable Time-Parallelization of Molecular Dynamics Simulations in Nano Mechanics
— Molecular Dynamics (MD) is an important atomistic simulation technique, with widespread use in computational chemistry, biology, and materials. An important limitation of MD is...
Yanan Yu, Ashok Srinivasan, Namas Chandra