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BMCBI
2008
123views more  BMCBI 2008»
13 years 5 months ago
Shape based indexing for faster search of RNA family databases
Background: Most non-coding RNA families exert their function by means of a conserved, common secondary structure. The Rfam data base contains more than five hundred structurally ...
Stefan Janssen, Jens Reeder, Robert Giegerich
BMCBI
2008
109views more  BMCBI 2008»
13 years 5 months ago
ConStruct: Improved construction of RNA consensus structures
Background: Aligning homologous non-coding RNAs (ncRNAs) correctly in terms of sequence and structure is an unresolved problem, due to both mathematical complexity and imperfect s...
Andreas Wilm, Kornelia Linnenbrink, Gerhard Steger
ICALP
2010
Springer
13 years 7 months ago
From Secrecy to Soundness: Efficient Verification via Secure Computation
d Abstract) Benny Applebaum1 , Yuval Ishai2 , and Eyal Kushilevitz3 1 Computer Science Department, Weizmann Institute of Science 2 Computer Science Department, Technion and UCLA 3 ...
Benny Applebaum, Yuval Ishai, Eyal Kushilevitz
HPCA
2008
IEEE
14 years 5 months ago
Performance and power optimization through data compression in Network-on-Chip architectures
The trend towards integrating multiple cores on the same die has accentuated the need for larger on-chip caches. Such large caches are constructed as a multitude of smaller cache ...
Reetuparna Das, Asit K. Mishra, Chrysostomos Nicop...
COCO
2010
Springer
149views Algorithms» more  COCO 2010»
13 years 7 months ago
Trade-Off Lower Bounds for Stack Machines
—A space bounded Stack Machine is a regular Turing Machine with a read-only input tape, several space bounded read-write work tapes, and an unbounded stack. Stack Machines with a...
Matei David, Periklis A. Papakonstantinou