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BMCBI
2010
151views more  BMCBI 2010»
13 years 5 months ago
TF-finder: A software package for identifying transcription factors involved in biological processes using microarray data and e
Background: Identification of transcription factors (TFs) involved in a biological process is the first step towards a better understanding of the underlying regulatory mechanisms...
Xiaoqi Cui, Tong Wang, Huann-Sheng Chen, Victor Bu...
NAR
2010
111views more  NAR 2010»
12 years 11 months ago
JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles
JASPAR (http://jaspar.genereg.net) is the leading open-access database of matrix profiles describing the DNA-binding patterns of transcription factors (TFs) and other proteins int...
Elodie Portales-Casamar, Supat Thongjuea, Andrew T...
BMCBI
2010
100views more  BMCBI 2010»
13 years 5 months ago
Trimming of mammalian transcriptional networks using network component analysis
Background: Network Component Analysis (NCA) has been used to deduce the activities of transcription factors (TFs) from gene expression data and the TF-gene binding relationship. ...
Linh M. Tran, Daniel R. Hyduke, James C. Liao
BMCBI
2010
97views more  BMCBI 2010»
13 years 5 months ago
Dual-functioning transcription factors in the developmental gene network of Drosophila melanogaster
Background: Quantitative models for transcriptional regulation have shown great promise for advancing our understanding of the biological mechanisms underlying gene regulation. Ho...
Denis C. Bauer, Fabian A. Buske, Timothy L. Bailey
TFS
2010
130views Education» more  TFS 2010»
12 years 11 months ago
Toward General Type-2 Fuzzy Logic Systems Based on zSlices
Abstract--Higher order fuzzy logic systems (FLSs), such as interval type-2 FLSs, have been shown to be very well suited to deal with the high levels of uncertainties present in the...
Christian Wagner, Hani Hagras