CANDC
2005
ACM
13 years 4 months ago
2005
ACM
Given an assembled genome of a diploid organism the haplotype assembly problem can be formulated as retrieval of a pair of haplotypes from a set of aligned weighted SNP fragments....
CANDC
2005
ACM
13 years 4 months ago
2005
ACM
We propose an algorithm of global multiple sequence alignment that is based on a measure of what we call information discrepancy. The algorithm follows a progressive alignment ite...
CANDC
2005
ACM
13 years 4 months ago
2005
ACM
The task of the quartet puzzling problem is to find a best-fitting binary X-tree for a finite n-set from confidence values for the 3 n 4 binary trees with exactly four leaves from...
CANDC
2005
ACM
13 years 4 months ago
2005
ACM
A DNA microarray can track the expression levels of thousands of genes simultaneously. Previous research has demonstrated that this technology can be useful in the classification ...
CANDC
2005
ACM
13 years 4 months ago
2005
ACM
CANDC
2005
ACM
13 years 4 months ago
2005
ACM
High throughput virtual screening is acknowledged as the initial means for identifying hit compounds that will be eventually transformed to leads or drug candidates. To improve qu...
CANDC
2005
ACM
13 years 4 months ago
2005
ACM
We introduce a new family of metrics for graphs of fixed size, based on counting-independent sets. Our definition is simpler and easier to e than the edge ideal metric family defi...
CANDC
2005
ACM
13 years 4 months ago
2005
ACM
Microarrays are becoming a ubiquitous tool of research in life sciences. However, the working principles of microarray-based methodologies are often misunderstood or apparently ig...
CANDC
2005
ACM
13 years 4 months ago
2005
ACM
Overlapping genes in mammalian genomes are unexpected phenomena even though hundreds of pairs of protein coding overlapping genes have been reported so far. Overlapping genes can ...
CANDC
2005
ACM
13 years 4 months ago
2005
ACM
We identified latent periodicity in catalytic domains of approximately 85% of annotated serine