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DNA
2011
Springer
233views Bioinformatics» more  DNA 2011»
8 years 2 months ago
Less Haste, Less Waste: On Recycling and Its Limits in Strand Displacement Systems
We study the potential for molecule recycling in chemical reaction systems and their DNA strand displacement realizations. Recycling happens when a product of one reaction is a rea...
Anne Condon, Alan J. Hu, Ján Manuch, Chris ...
BMCBI
2007
159views more  BMCBI 2007»
9 years 2 months ago
Computational genes: a tool for molecular diagnosis and therapy of aberrant mutational phenotype
Background: A finite state machine manipulating information-carrying DNA strands can be used to perform autonomous molecular-scale computations at the cellular level. Results: We ...
Israel Mark Martínez-Pérez, Gong Zha...
CORR
2010
Springer
133views Education» more  CORR 2010»
9 years 2 months ago
Scalable, Time-Responsive, Digital, Energy-Efficient Molecular Circuits using DNA Strand Displacement
We propose a novel theoretical biomolecular design to implement any Boolean circuit using the mechanism of DNA strand displacement. The design is scalable: all species of DNA stra...
Ehsan Chiniforooshan, David Doty, Lila Kari, Shinn...
PDPTA
2003
9 years 3 months ago
Procedures for Computing the Maximum with DNA Strands
Abstract: In recent works for high performance computing, computation with DNA molecules, that is, DNA computing, has considerable attention as one of nonsilicon based computings. ...
Satoshi Kamio, Akiko Takehara, Akihiro Fujiwara
FCS
2006
9 years 3 months ago
Procedures for multiplication and division in DNA computing
: In this paper, we propose two procedures for multiplication and division using DNA strands. We first show a procedure for multiplication of a pair of two binary numbers. The proc...
Hiroki Fukagawa, Akihiro Fujiwara
AI
2003
Springer
9 years 7 months ago
Hybrid Randomised Neighbourhoods Improve Stochastic Local Search for DNA Code Design
Sets of DNA strands that satisfy combinatorial constraints play an important role in various approaches to biomolecular computation, nanostructure design, and molecular tagging. Th...
Dan C. Tulpan, Holger H. Hoos
IPPS
2003
IEEE
9 years 7 months ago
Addressable Procedures for Logic and Arithmetic Operations with DNA Strands
In this paper, we consider addressable procedures with DNA strands for logic and arithmetic operations. Using a theoretical model for DNA computing, we first show a DNA represent...
Akihiro Fujiwara, Ken-ichi Matsumoto, Wei Chen
DNA
2004
Springer
126views Bioinformatics» more  DNA 2004»
9 years 7 months ago
DNA Extraction by XPCR
The extraction of DNA strands including a given sequence of bases is a crucial step in the Adleman-Lipton extract model of DNA computing. In this paper, a special type of PCR is pr...
Giuditta Franco, Cinzia Giagulli, Carlo Laudanna, ...
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