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BMCBI
2010
121views more  BMCBI 2010»
13 years 4 months ago
A Markov blanket-based method for detecting causal SNPs in GWAS
Background: Detecting epistatic interactions associated with complex and common diseases can help to improve prevention, diagnosis and treatment of these diseases. With the develo...
Bing Han, Meeyoung Park, Xue-wen Chen
BMCBI
2010
87views more  BMCBI 2010»
13 years 4 months ago
Prodigal: prokaryotic gene recognition and translation initiation site identification
Background: The quality of automated gene prediction in microbial organisms has improved steadily over the past decade, but there is still room for improvement. Increasing the num...
Doug Hyatt, Gwo-Liang Chen, Philip F. LoCascio, Mi...
NSDI
2004
13 years 6 months ago
Session State: Beyond Soft State
The cost and complexity of administration of large systems has come to dominate their total cost of ownership. Stateless and soft-state components, such as Web servers or network ...
Benjamin C. Ling, Emre Kiciman, Armando Fox
BIOCOMP
2007
13 years 6 months ago
Quality-Based Similarity Search for Biological Sequence Databases
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ...
Xuehui Li, Tamer Kahveci
DSN
2008
IEEE
13 years 6 months ago
Convicting exploitable software vulnerabilities: An efficient input provenance based approach
Software vulnerabilities are the root cause of a wide range of attacks. Existing vulnerability scanning tools are able to produce a set of suspects. However, they often suffer fro...
Zhiqiang Lin, Xiangyu Zhang, Dongyan Xu
LISA
2007
13 years 6 months ago
ATLANTIDES: An Architecture for Alert Verification in Network Intrusion Detection Systems
We present an architecture1 designed for alert verification (i.e., to reduce false positives) in network intrusion-detection systems. Our technique is based on a systematic (and a...
Damiano Bolzoni, Bruno Crispo, Sandro Etalle
SIGADA
1994
Springer
13 years 8 months ago
Always One More Bug: Applying AdaWise to Improve Ada Code
AdaWise, a set of tools currently under development at ORA, performs automatic checks to verify the absence of common run-time errors affecting the correctness or portability of A...
Cheryl Barbasch, Dan Egnor
KBSE
2003
IEEE
13 years 9 months ago
An Empirical Study on Groupware Support for Software Inspection Meetings
Software inspection is an effective way to assess product quality and to reduce the number of defects. In a software inspection the inspection meeting is a key activity to agree o...
Paul Grünbacher, Michael Halling, Stefan Biff...
ISESE
2003
IEEE
13 years 9 months ago
An Empirical Study of Web-Based Inspection Meetings
Software inspections are a software engineering “best practice” for defect detection and rework reduction. In this paper, we describe an empirical evaluation with using a tool...
Filippo Lanubile, Teresa Mallardo
VMCAI
2004
Springer
13 years 10 months ago
Applying Jlint to Space Exploration Software
Abstract. Java is a very successful programming language which is also becoming widespread in embedded systems, where software correctness is critical. Jlint is a simple but highly...
Cyrille Artho, Klaus Havelund