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JBI
2006
107views Bioinformatics» more  JBI 2006»
13 years 5 months ago
KDE Bioscience: Platform for bioinformatics analysis workflows
Bioinformatics is a dynamic research area in which a large number of algorithms and programs have been developed rapidly and independently without much consideration so far of the...
Qiang Lu, Pei Hao, Vasa Curcin, Wei-Zhong He, Yuan...
JBI
2006
13 years 5 months ago
Interpreting procedures from descriptive guidelines
Mor Peleg, Lily A. Gutnik, Vincenza Snow, Vimla L....
JBI
2006
13 years 5 months ago
Missing data and the design of phylogenetic analyses
Concerns about the deleterious effects of missing data may often determine which characters and taxa are included in phylogenetic analyses. For example, researchers may exclude ta...
John J. Wiens
JBI
2006
13 years 5 months ago
Conceptualizing the world: Lessons from history
Throughout history, philosophers, scientists, and other scholars have named and organized the salient elements of the world. These efforts have led to conceptualizations that diff...
Alexa T. McCray
JBI
2006
13 years 5 months ago
Support versus corroboration
Numerous metrics have been developed that attempt to assess the reliability of phylogenetic trees. Several of these commonly used measures of tree and tree branch support are desc...
Mary G. Egan
JBI
2006
13 years 5 months ago
What's in a character?
Systematic analyses are included as integral parts of bioinformatic analysis. The use of phenetic and phylogenetic trees in many of the newer areas of biology create a need for bi...
Robert DeSalle
JBI
2006
13 years 5 months ago
In defense of the Desiderata
A 1998 paper that delineated desirable characteristics, or desiderata for controlled medical terminologies attempted to summarize emerging consensus regarding structural issues of...
James J. Cimino
JBI
2006
13 years 5 months ago
Strategies for referent tracking in electronic health records
The goal of referent tracking is to create an ever-growing pool of data relating to the entities existing in concrete spatiotemporal reality. In the context of Electronic Healthca...
Werner Ceusters, Barry Smith
JBI
2006
13 years 5 months ago
Phylogenetics by likelihood: Evolutionary modeling as a tool for understanding the genome
Molecular evolutionary studies provide a means of investigating how cells function and how organisms adapt to their environment. The products of evolutionary studies provide medic...
Carolin Kosiol, Lee Bofkin, Simon Whelan
JBI
2006
117views Bioinformatics» more  JBI 2006»
13 years 5 months ago
Desiderata for domain reference ontologies in biomedicine
Domain reference ontologies represent knowledge about a particular part of the world in a way that is independent from specific objectives, through a theory of the domain. An exam...
Anita Burgun