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JCB
2000
105views more  JCB 2000»
11 years 5 months ago
A Greedy Algorithm for Aligning DNA Sequences
For aligning DNA sequences that differ only by sequencing errors, or by equivalent errors from other sources, a greedy algorithm can be much faster than traditional dynamic progra...
Zheng Zhang 0004, Scott Schwartz, Lukas Wagner, We...
JCB
2000
61views more  JCB 2000»
11 years 5 months ago
Estimation of the Mutation Rate During Error-prone Polymerase Chain Reaction
Dai Wang, Cheng Zhao, Rong Cheng, Fengzhu Sun
JCB
2000
90views more  JCB 2000»
11 years 5 months ago
Geometric Invariant Core for the CL and CH1 Domains of Immunoglobulin Molecules
A previously developed algorithmic method for identifying a geometric invariant of protein structures, termed geometrical core, is extended to the and 1 domains of immunoglobulin ...
Ognyan Stoyanov, Alexander Kister, Israel Gelfand,...
JCB
2000
146views more  JCB 2000»
11 years 5 months ago
Bayesian Segmentation of Protein Secondary Structure
We present a novel method for predicting the secondary structure of a protein from its amino acid sequence. Most existing methods predict each position in turn based on a local wi...
Scott C. Schmidler, Jun S. Liu, Douglas L. Brutlag
JCB
2000
75views more  JCB 2000»
11 years 5 months ago
A Bayesian Model for Detecting Past Recombination Events in DNA Multiple Alignments
Gráinne McGuire, Frank Wright, Michael J. P...
JCB
2000
87views more  JCB 2000»
11 years 5 months ago
Comparison of Additive Trees Using Circular Orders
It has been postulated that existing species have been linked in the past in a way that can be described using an additive tree structure. Any such tree structure reflecting speci...
Vladimir Makarenkov, Bruno Leclerc
JCB
2000
68views more  JCB 2000»
11 years 5 months ago
Analysis of Variance for Gene Expression Microarray Data
M. Kathleen Kerr, Mitchell Martin, Gary A. Churchi...
JCB
2000
69views more  JCB 2000»
11 years 5 months ago
An Algorithm Combining Discrete and Continuous Methods for Optical Mapping
Richard M. Karp, Itsik Pe'er, Ron Shamir
JCB
2000
107views more  JCB 2000»
11 years 5 months ago
A Discriminative Framework for Detecting Remote Protein Homologies
A new method for detecting remote protein homologies is introduced and shown to perform well in classifying protein domains by SCOP superfamily. The method is a variant of support...
Tommi Jaakkola, Mark Diekhans, David Haussler
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