BMCBI
2011
12 years 11 months ago
2011
Background: Genes work coordinately as gene modules or gene networks. Various computational approaches have been proposed to find gene modules based on gene expression data; for e...
BMCBI
2011
12 years 11 months ago
2011
Background: With the growing availability of entire genome sequences, an increasing number of scientists can exploit oligonucleotide microarrays for genome-scale expression studie...
BIB
2010
13 years 2 months ago
2010
Genome-wide sequencing has enabled modern biomedical research to relate more and more events in healthy as well as disease-affected cells and tissues to the genomic sequence. Now ...
PRIB
2010
Springer
13 years 3 months ago
2010
Springer
We studied 1372 LacI-family transcription factors and their 4484 DNA binding sites using machine learning algorithms and feature selection techniques. The Naive Bayes classifier a...
NAR
2008
13 years 4 months ago
2008
Transcription factors (TFs) play key roles in controlling gene expression. Systematic identification and annotation of TFs, followed by construction of TF databases may serve as u...
NAR
2000
13 years 4 months ago
2000
Transcription Regulatory Regions Database (TRRD) has been developed for accumulation of experimental information on the structure
BMCBI
2004
13 years 4 months ago
2004
Background: Functional genomics studies are yielding information about regulatory processes in the cell at an unprecedented scale. In the yeast S. cerevisiae, DNA microarrays have...
BMCBI
2004
13 years 4 months ago
2004
Background: Transcriptional regulation is a key mechanism in the functioning of the cell, and is mostly effected through transcription factors binding to specific recognition moti...
BMCBI
2004
13 years 4 months ago
2004
Background: All known genomes code for a large number of transcription factors. It is important to develop methods that will reveal how these transcription factors act on a genome...
BMCBI
2005
13 years 4 months ago
2005
Background: NemaFootPrinter (Nematode Transcription Factor Scan Through Philogenetic Footprinting) is a web-based software for interactive identification of conserved, non-exonic ...