Sciweavers

Free Online Productivity Tools i2Speak i2Symbol i2OCR iTex2Img iWeb2Print iWeb2Shot i2Type iPdf2Split iPdf2Merge i2Bopomofo i2Arabic i2Style i2Image i2PDF iLatex2Rtf Sci2ools

12

GCB
1997
Springer

favoriteEmaildiscussreport

74views Biometrics» more GCB 1997»

Using constraint programming for lattice protein folding

13 years 8 months ago

Using constraint programming for lattice protein folding

Download psb.stanford.edu

We present a global search technique for nding the global minimal conformation of a sequence in Dill's HP-lattice model5;6 . The HP-lattice model is a simpli ed model of proteins, that has become a major tool for investigating general properties of protein folding. The search techniqueuses constraint programmingfor e ciently pruning the search tree. We state the problem of structure prediction in the HP-lattice model and describe our implementationusing the Oz-system7 .

Rolf Backofen

Real-time Traffic

Biometrics | GCB 1997 | Global Minimal Conformation | Global Search Technique | HP-lattice Model |

claim paper

Related Content

» A hybrid approach to protein folding problem integrating constraint programming with local...

» A New Constraint Solver for 3D Lattices and Its Application to the Protein Folding Problem

» Inductive Logic Programming Used to Discover Topological Constraints in Protein Structures

» Delta A Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lat...

» Incorporating Knowledge of Secondary Structures in a LSystemBased Encoding for Protein Fol...

» CPSPtools Exact and complete algorithms for highthroughput 3D lattice protein studies

» Constraint Logic Programming approach to protein structure prediction

» Heuristics optimizations and parallelism for protein structure prediction in CLPFD

» Visualization of LatticeBased Protein Folding Simulations

Post Info
More Details (n/a)

Added	07 Aug 2010
Updated	07 Aug 2010
Type	Conference
Year	1997
Where	GCB
Authors	Rolf Backofen

Comments (0)