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GCB
2006
Springer

PALMA: Perfect Alignments using Large Margin Algorithms

11 years 5 months ago
PALMA: Perfect Alignments using Large Margin Algorithms
: Despite many years of research on how to properly align sequences in the presence of sequencing errors, alternative splicing and micro-exons, the correct alignment of mRNA sequences to genomic DNA is still a challenging task. We present a novel approach based on large margin learning that combines kernel based splice site predictions with common sequence alignment techniques. By solving a convex optimization problem, our algorithm
Gunnar Rätsch, Bettina Hepp, Uta Schulze, Che
Added 23 Aug 2010
Updated 23 Aug 2010
Type Conference
Year 2006
Where GCB
Authors Gunnar Rätsch, Bettina Hepp, Uta Schulze, Cheng Soon Ong
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