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10 years 9 months ago
Integrated Sidelobe Level of sets of Rotated Legendre Sequences
We here address the problem of constructing sets of sequences with low integrated aperiodic auto- and crosscorrelations when the constraint of antipodal symbols is enforced. Our m...
Salvador Javier Haboba, Riccardo Rovatti, Gianluca...
11 years 4 hour ago
Ultra-fast sequence clustering from similarity networks with SiLiX
Background: The number of gene sequences that are available for comparative genomics approaches is increasing extremely quickly. A current challenge is to be able to handle this h...
Vincent Miele, Simon Penel, Laurent Duret
140views more  NAR 2010»
11 years 7 days ago
GUIDANCE: a web server for assessing alignment confidence scores
Evaluating the accuracy of multiple sequence alignment (MSA) is critical for virtually every comparative sequence analysis that uses an MSA as input. Here we present the GUIDANCE ...
Osnat Penn, Eyal Privman, Haim Ashkenazy, Giddy La...
174views more  JCIT 2010»
11 years 9 days ago
Efficient Ming of Top-K Closed Sequences
Sequence mining is an important data mining task. In order to retrieve interesting sequences from a large database, a minimum support threshold is needed to be specified. Unfortun...
Panida Songram
141views more  TIT 2011»
11 years 13 days ago
Near-Complementary Sequences With Low PMEPR for Peak Power Control in Multicarrier Communications
New families of near-complementary sequences are presented for peak power control in multicarrier communications. A framework for near-complementary sequences is given by the expl...
Nam Yul Yu, Guang Gong
11 years 13 days ago
Temporal synchronization of non-overlapping videos using known object motion
This paper presents a robust technique for temporally aligning multiple video sequences that have no spatial overlap between their fields of view. It is assumed that (i) a moving...
Darlan N. Brito, Flávio L. C. Pádua,...
251views Computer Vision» more  NAR 2011»
11 years 13 days ago
The IMGT/HLA database
The IMGT/HLA database ( hla) has provided a centralized repository for the sequences of the alleles named by the WHO Nomenclature Committee for Factors o...
James Robinson, Kavita Mistry, Hamish McWilliam, R...
11 years 15 days ago
Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling
Background: Molecular database search tools need statistical models to assess the significance for the resulting hits. In the classical approach one asks the question how probable...
Stefan Wolfsheimer, Inke Herms, Sven Rahmann, Alex...
11 years 2 months ago
Using the Genetic Code Wisdom for Recognizing Protein Coding Sequences
We have elaborated a new method of recognizing protein coding sequences in genomic sequences. The method is exploiting a specific way of genetic code degeneration and relations bet...
Pawel Blazej, Pawel Mackiewicz, Stanislaw Cebrat
143views more  BMCBI 2010»
11 years 2 months ago
A genome alignment algorithm based on compression
Background: Traditional genome alignment methods consider sequence alignment as a variation of the string edit distance problem, and perform alignment by matching characters of th...
Minh Duc Cao, Trevor I. Dix, Lloyd Allison