CPM
13 years 11 months ago
2004 Springer 
In this paper we investigate the protein sequence design (PSD) problem (also known as the inverse protein folding problem) under the Canonical model 4 on 2D and 3D lattices [12, 25...
CPM
13 years 11 months ago
2004 Springer
Abstract. This paper addresses the problem of aligning multiple sequences of non-coding RNA genes. We approach this problem with the biologically motivated paradigm that scoring of...
CPM
13 years 11 months ago
2004 Springer 
We consider succinct, or highly space-efficient, representations of a (static) string consisting of n pairs of balanced parentheses, that support natural operations such as findi...
CPM
13 years 11 months ago
2004 Springer 
For a set of rooted, unordered, distinctly leaf-labeled trees, the NP-hard maximum agreement subtree problem (MAST) asks for a tree contained (up to isomorphism or homeomorphism) i...
CPM
13 years 9 months ago
2004 Springer 
The problem of sorting a signed permutation by reversals is inspired by genome rearrangements in computational molecular biology. Given two genomes represented as two signed permut...
|
Combinatorics