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» A DNA Sticker Algorithm for Solving N-Queen Problem
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IPPS
2000
IEEE
13 years 10 months ago
A Surface-Based DNA Algorithm for the Expansion of Symbolic Determinants
In the past few years since Adleman’s pioneering work on solving the HPP(Hamiltonian Path Problem) with a DNA-based computer [1], many algorithms have been designed on solving NP...
Zhiquan Frank Qiu, Mi Lu
MEMBRANE
2005
Springer
13 years 11 months ago
Boolean Circuits and a DNA Algorithm in Membrane Computing
In the present paper we propose a way to simulate Boolean gates and circuits in the framework of P systems with active membranes using inhibiting/de-inhibiting rules. This new appr...
Mihai Ionescu, Tseren-Onolt Ishdorj
IPPS
2006
IEEE
13 years 11 months ago
FPGA based architecture for DNA sequence comparison and database search
DNA sequence comparison is a computationally intensive problem, known widely since the competition for human DNA decryption. Database search for DNA sequence comparison is of grea...
Euripides Sotiriades, Christos Kozanitis, Apostolo...
CPM
2005
Springer
116views Combinatorics» more  CPM 2005»
13 years 11 months ago
Exact and Approximation Algorithms for DNA Tag Set Design
In this paper we propose new solution methods for designing tag sets for use in universal DNA arrays. First, we give integer linear programming formulations for two previous formal...
Ion I. Mandoiu, Dragos Trinca
DNA
2004
Springer
13 years 11 months ago
Efficient Initial Pool Generation for Weighted Graph Problems Using Parallel Overlap Assembly
Most DNA computing algorithms for mathematical problems start with combinatorial generation of an initial pool. Several methods for initialpool generation have been proposed, inclu...
Ji Youn Lee, Hee-Woong Lim, Suk-In Yoo, Byoung-Tak...