329 search results - page 2 / 66 » A Graph Theoretic Approach to Protein Structure Selection |
AINA
2009
IEEE
13 years 11 months ago
2009
IEEE
—In this paper we introduce the notion of protein interaction network. This is a graph whose vertices are the protein’s amino acids and whose edges are the interactions between...
APBC
2004
13 years 6 months ago
2004
Here we investigate an extension of a previously suggested "automatic amide I frequency selection procedure" where we introduce an additional criterion utilizing empiric...
RECOMB
2004
Springer
14 years 5 months ago
2004
Springer
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
GCB
2004
Springer
13 years 10 months ago
2004
Springer
: We introduce the novel concept of graph alignment, a generalization of graph isomorphism that is motivated by the commonly used multiple sequence alignments. Graph alignments and...
BIRD
2008
Springer
13 years 6 months ago
2008
Springer
Abstract. We describe a new method for the exploration of evolutionary relations between protein structures. The approach is based on the ESSM algorithm for detecting structural mu...