16 search results - page 2 / 4 » A Smith-Waterman Systolic Cell |
BMCBI
2011
12 years 9 months ago
2011
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
FPL
2008
Springer
13 years 7 months ago
2008
Springer
Wavefront algorithms, such as the Smith-Waterman algorithm, are commonly used in bioinformatics for exact local and global sequence alignment. These algorithms are highly computat...
BIBE
2008
IEEE
13 years 12 months ago
2008
IEEE
— The Smith-Waterman algorithm is a dynamic programming method for determining optimal local alignments between nucleotide or protein sequences. However, it suffers from quadrati...
PROCEDIA
2010
13 years 4 days ago
2010
Currently several computational problems require high processing power to handle huge amounts of data, although underlying core algorithms appear to be rather simple. Especially i...
CF
2008
ACM
13 years 7 months ago
2008
ACM
This paper contributes and evaluates a model and a methodology for implementing parallel wavefront algorithms on the Cell Broadband Engine. Wavefront algorithms are vital in sever...