28 search results - page 3 / 6 » A Structure-Based Flexible Search Method for Motifs in RNA |
BMCBI
2006
13 years 5 months ago
2006
Background: Identifying functional elements, such as transcriptional factor binding sites, is a fundamental step in reconstructing gene regulatory networks and remains a challengi...
BMCBI
2006
13 years 5 months ago
2006
Background: White Spot Syndrome Virus, a member of the virus family Nimaviridae, is a large dsDNA virus infecting shrimp and other crustacean species. Although limited information...
JCB
2008
13 years 5 months ago
2008
We present BayesMD, a Bayesian Motif Discovery model with several new features. Three different types of biological a priori knowledge are built into the framework in a modular fa...
ALMOB
2006
13 years 5 months ago
2006
The main goal of the motif finding problem is to detect novel, over-represented unknown signals in a set of sequences (e.g. transcription factor binding sites in a genome). The mo...
BMCBI
2008
13 years 5 months ago
2008
Background: Many programs have been developed to identify transcription factor binding sites. However, most of them are not able to infer two-word motifs with variable spacer leng...