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IPPS
1999
IEEE
13 years 9 months ago
Parallel Biological Sequence Comparison Using Prefix Computations
We present practical parallel algorithms using prefix computations for various problems that arise in pairwise comparison of biological sequences. We consider both constant and af...
Srinivas Aluru, Natsuhiko Futamura, Kishan Mehrotr...
RECOMB
2001
Springer
14 years 5 months ago
Geometric algorithms for the analysis of 2D-electrophoresis gels
In proteomics 2?dimensional gel electrophoresis (2?DE) is a separation technique for proteins. The resulting protein spots can be identified by either using picking robots and sub...
Alon Efrat, Frank Hoffmann, Klaus Kriegel, Christo...
BMCBI
2008
115views more  BMCBI 2008»
13 years 5 months ago
BioGraphE: high-performance bionetwork analysis using the Biological Graph Environment
Background: Graphs and networks are common analysis representations for biological systems. Many traditional graph algorithms such as k-clique, k-coloring, and subgraph matching h...
George Chin Jr., Daniel G. Chavarría-Mirand...
PAMI
2007
138views more  PAMI 2007»
13 years 4 months ago
A Fast Biologically Inspired Algorithm for Recurrent Motion Estimation
—We have previously developed a neurodynamical model of motion segregation in cortical visual area V1 and MT of the dorsal stream. The model explains how motion ambiguities cause...
Pierre Bayerl, Heiko Neumann
ICCV
2005
IEEE
14 years 6 months ago
Quasiconvex Optimization for Robust Geometric Reconstruction
Geometric reconstruction problems in computer vision are often solved by minimizing a cost function that combines the reprojection errors in the 2D images. In this paper, we show t...
Qifa Ke, Takeo Kanade