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CSB
2004
IEEE
13 years 9 months ago
Space-Conserving Optimal DNA-Protein Alignment
DNA-protein alignment algorithms can be used to discover coding sequences in a genomic sequence, if the corresponding protein derivatives are known. They can also be used to ident...
Pang Ko, Mahesh Narayanan, Anantharaman Kalyanaram...
ICIAP
2001
Springer
14 years 5 months ago
Global Optimization of Deformable Surface Meshes Based on Genetic Algorithms
Deformable models are by their formulation able to solve surface extraction problem from noisy volumetric image data encountered commonly in medical image analysis. However, this ...
Jussi Tohka
CGF
2011
12 years 9 months ago
Global Structure Optimization of Quadrilateral Meshes
We introduce a fully automatic algorithm which optimizes the high-level structure of a given quadrilateral mesh to achieve a coarser quadrangular base complex. Such a topological ...
David Bommes, Timm Lempfer, Leif Kobbelt
RECOMB
2009
Springer
14 years 6 months ago
Learning Models for Aligning Protein Sequences with Predicted Secondary Structure
Accurately aligning distant protein sequences is notoriously difficult. A recent approach to improving alignment accuracy is to use additional information such as predicted seconda...
Eagu Kim, Travis J. Wheeler, John D. Kececioglu
BIOCOMP
2008
13 years 7 months ago
GIPSCo: A Method for Comparison of Protein Structures Based on Geometric Invariants
Protein structure comparison is important for elucidation of evolutionary relationships, function and functionally important amino acid residues. We propose Geometric Invariant bas...
Sandeep Deshmukh, Aniket Dalal, Pramod Wangikar